3J9W · U

rna_00462__3J9W_1_U

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00462__3J9W_1_U
RNA-Solo ID: rna_00462
Split identity: rna_00462
Source structure: 3J9W_1_AX
Length: 77 nt
Canonical chains: U
Partition: train

MD-derived metadata

3.86 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.81 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUCCGGUAGUUCAGUUGGUUAGAAUGCCUGCCUGUCACGCAGGAGGUCGCGGGUUCGAGUCCCGUCCGGACCGCCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
U	A	U	AX

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_00462__3J9W_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

92adfb645fb700425bd4fb3453fbcb16136fbbc5fe13b805f97e61b38700d06f

rna.gro · SHA-256

c9457aad80d74a63e7db2ff3b13c08f37068c1e6b7148e8b0105537f458669f2

rna.pdb · SHA-256

0e94bef44bcfe57b76199687934fee0052d66d60385c21375d8cc28cfbff8db5