5DDP · B

rna_00467__5DDP_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00467__5DDP_1_B
RNA-Solo ID: rna_00467
Split identity: rna_00467
Source structure: 5DDP_1_B
Length: 61 nt
Canonical chains: B
Partition: train

MD-derived metadata

3.22 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.90 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGUUGACCCAGGAAACUGGGCGGAAGUAAGGUCCAUUGCACUCCGGGCCUGAAGCAACGCG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

cd6a15e8f125c4d3d24b39123d29de52f054075a31868b836334489d3e462302

rna.gro · SHA-256

9950b8a77af57941786ce89c91b96799a94d3ee2ea2e25f4d9ca1e921ac9bdc4

rna.pdb · SHA-256

9496935579839bd51faef807a2c4c33831545c31dc2d06250fdb81793860d8c7