4V8P · VA

rna_00493__4V8P_1_VA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00493__4V8P_1_VA
RNA-Solo ID: rna_00493
Split identity: rna_00493
Source structure: 4V8P_1_C3
Length: 120 nt
Canonical chains: VA
Partition: train

MD-derived metadata

6.78 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.57 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GUUGUCGGCCAUACUAAGGUGAAAACACCGGAUCCCAUUCGAACUCCGAAGUUAAGCGCCUUAAGGCUGGGUUAGUACUAAGGUGGGGGACCGCUUGGGAAGUCCCAGUGUCGAUAGCCU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
VA	A	VA	C3

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_00493__4V8P_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

141b815b396a1940e9b99e7613937d5446cbaa30828f015c56438978d53b4a0c

rna.gro · SHA-256

c052299bc3fc13767b9235e850c83587f73a01f3d2036a8b32264f2ff6f3f22f

rna.pdb · SHA-256

64b1c326edb2a8f1b2e17f7e3f9265a09d27ba5e4d44da90e793775936a33cd5