3DVZ · A

rna_00515__3DVZ_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00515__3DVZ_1_A
RNA-Solo ID: rna_00515
Split identity: rna_00515
Source structure: 3DVZ_1_A
Length: 27 nt
Canonical chains: A
Partition: test_struct

MD-derived metadata

2.19 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 14.13 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGCUCCUAGUACGAGAGGACCGGAGUG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

9902aa3b0da98dee68a634e17abaa8af94b958b287bac1e245e23940976b7388

rna.gro · SHA-256

770541985d35c729c69a389ee0e06f3bde430bcad377908f8ed27fddee12fba0

rna.pdb · SHA-256

b1b9ee18e433b04040a8ba4586a20374b15d053a04e0b1ca09359cea9b5f3a76