3DW5 · A

rna_00552__3DW5_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00552__3DW5_1_A
RNA-Solo ID: rna_00552
Split identity: rna_00552
Source structure: 3DW5_1_A
Length: 27 nt
Canonical chains: A
Partition: test_struct

MD-derived metadata

1.89 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 14.14 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGCUCCUAGUACGAGAGGACCGGAGUG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

d39ee0a14db7d2ddb4500cb0ab34422837eeaa3db86cd31ee9c568c0cd684b8d

rna.gro · SHA-256

06d66be562c2941fda3e09817ebc4a37b7948491e92636b1023f8f0c1eff95c5

rna.pdb · SHA-256

5ef6872d437b363e1f27647d3e5b4918524e46c8b24bdd17278512940c9186d9