5UX0 · E

rna_00560__5UX0_1_E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00560__5UX0_1_E
RNA-Solo ID: rna_00560
Split identity: rna_00560
Source structure: 5UX0_1_E
Length: 18 nt
Canonical chains: E
Partition: train

MD-derived metadata

8.46 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 18.32 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUACAACCUACUACCUC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	E

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

febcc741f3776548884e2a5cebe7317f72ab9244665d1c4515a67c1e6d27103c

rna.gro · SHA-256

11695af970e12fa361c330fad8459f72c682ad851e6fe70d343b57822fb99851

rna.pdb · SHA-256

b6bdbc018697a13b2dd30ffd5622a3c2884814a21e84dafb6f24d2f469d8c183