6P4G · JA

rna_00565__6P4G_1_JA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00565__6P4G_1_JA
RNA-Solo ID: rna_00565
Split identity: rna_00565
Source structure: 6P4G_1_1
Length: 203 nt
Canonical chains: JA
Partition: train

MD-derived metadata

18.86 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 44.48 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CAUCAUUCUAUGGUUACCCAUCAUUAGAGGAAAUUUCCAAUAAACUCUGGUGUAAGGCUUAGAGUGAUGGUCGAGGUGCCCUAUUUAGGGUGAGGAGCCUCGGUGGCAGCCCCACCAAAUCCUCUAUUGGAUAGGAACAGCUGUACUGGGCAGUUACAGCAGUCGUAUGGUAACACAUGCGGCGUUCCGAAAUACCAUGCCUG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
JA	A	JA	1

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

c8c256dba6f69841e02b1cd2f87877d5020ddaaa3d4abaf3d0029b8874897b7f

rna.gro · SHA-256

b736d48f79bfc10a538e5eb3e5be4ba3a10b1bf2f331dcccec6d0c755a5dd8f8

rna.pdb · SHA-256

1ac3997d4614648c4537030a9b2bda96813b5bc1ba207cc4beb74088f1a8d289