3SD3 · A

rna_00577__3SD3_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00577__3SD3_1_A
RNA-Solo ID: rna_00577
Split identity: rna_00577
Source structure: 3SD3_1_A
Length: 89 nt
Canonical chains: A
Partition: train

MD-derived metadata

2.32 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.13 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGAGAGUAGAUGAUUCGCGUUAAGCGUGUGUGAAUGGGAUGUCGUCACACAACGAAGCGAGAGCGCGGUGAAUCAUUGCAUCCGCUCCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

32d02284866c0cc0cb85c15c9a755152a6a2369960a3acb74c940960a3bec6db

rna.gro · SHA-256

7e83e765accb4f36107f48f85b7bc934f98ed8c2f2ffb2448176ec5323d22f5f

rna.pdb · SHA-256

fd14a28222ea63072f609c65f3171ab24d05c7e5cbdc0ffb4ad7f6414358a03d