4PQU · E

rna_00601__4PQU_1_E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00601__4PQU_1_E
RNA-Solo ID: rna_00601
Split identity: rna_00601
Source structure: 4PQU_1_T
Length: 21 nt
Canonical chains: E
Partition: val

MD-derived metadata

11.11 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 19.11 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUCGGCGCCCGAACAGGGAC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	T

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

b740cf453c18faee379f954f02beda8aab198a13164c1d80ccb2c3a1c5383dbe

rna.gro · SHA-256

008564bd61505693fd47e3ac21136ffe9c42b27b978cb2dcc0bc816bb2b2aec1

rna.pdb · SHA-256

ba7fbe123ea583a3d8c3824d48789b16f177fc37b252734e2947f25048d98551