3EPH · D

rna_00638__3EPH_1_D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00638__3EPH_1_D
RNA-Solo ID: rna_00638
Split identity: rna_00638
Source structure: 3EPH_1_F
Length: 69 nt
Canonical chains: D
Partition: train

MD-derived metadata

3.10 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 21.69 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CUCGUAUGGCGCAGUGGUAGCGCAGCAGAUUGCAAAUCUGUUGGUCCUUAGUUCGAUCCUGAGUGCGAG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	F

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

dc87f3f22a88c32ef08c78d02288304393d58e9c243a6ac4fae1aebef198937b

rna.gro · SHA-256

4a3aa8bdabfe56bc7cf1b6c92477a508f2b96253b4473a247271d495e4ff5717

rna.pdb · SHA-256

582d9b337fec54ed53a4076558e70d0dbffffbb487f764950a18ae2d1455f1cd