3EPL · D

rna_00638__3EPL_1_D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00638__3EPL_1_D
RNA-Solo ID: rna_00638
Split identity: rna_00638
Source structure: 3EPL_1_F
Length: 69 nt
Canonical chains: D
Partition: train

MD-derived metadata

3.84 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.11 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CUCGUAUGGCGCAGUGGUAGCGCAGCAGAUUGCAAAUCUGUUGGUCCUUAGUUCGAUCCUGAGUGCGAG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	F

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

36adca88b55316378232acc4635f443cffa7daaddca75a96e76ad2d9fbb2104e

rna.gro · SHA-256

02f3a560d33b76b31707f4eb31451eff67b7170c41fd7500952896cd6b82019f

rna.pdb · SHA-256

3699d09240d2c13f77ce89dc4a5ecabfe7092c5ea7f5add13dc023240109e338