5VJB · A

rna_00646__5VJB_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00646__5VJB_1_A
RNA-Solo ID: rna_00646
Split identity: rna_00646
Source structure: 5VJB_1_A
Length: 16 nt
Canonical chains: A
Partition: val

MD-derived metadata

1.21 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 10.32 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCGGGGACGACCCUGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

f95bda4a20caf38319604e55cdd715d416aa42de08bb544572783e6d22bc0d5a

rna.gro · SHA-256

3f41e37860a1fb99c1b5677d48a6e933654eb1f2ecaf8093029a149b46f34f8c

rna.pdb · SHA-256

588bd7b7a969ff82c9d8e724509f2bdf12fc259f90fc3440c882e6fa9219b855