5G4U · A / B / E / F / I / J

rna_00656__5G4U_1_A-B-E-F-I-J__repeat01

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00656__5G4U_1_A-B-E-F-I-J__repeat01
RNA-Solo ID: rna_00656
Split identity: rna_00656
Source structure: 5G4U_1_E-F
Length: 114 nt
Canonical chains: A, B, E, F, I, J
Partition: train

MD-derived metadata

2.41 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 29.80 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCGAAGAUCCGGUGAGCCGGCGAAGAUCCGGUGAGCCGGCGAAGAUCCGGUGAGCCGGCGAAGAUCCGGUGAGCCGGCGAAGAUCCGGUGAGCCGGCGAAGAUCCGGUGAGCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B
E	E	E	E
F	F	F	F
I	I	I	I
J	J	J	J

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

c6abb647def1150eb4465266cd87c0189d67ee79d02ba9356de048313dafa98c

rna.gro · SHA-256

5acb4692aa76ae2b48af1d1e78cbdd21757401f071165657c50a1ff8b9ee3698

rna.pdb · SHA-256

53857d0b6b3b87a95eb3d2db2fb1768c9a19177f3d3837d676f5b0a05d03eacc