5BKL · JA / MA

rna_00688__5BKL_1_JA-MA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00688__5BKL_1_JA-MA
RNA-Solo ID: rna_00688
Split identity: rna_00688
Source structure: 5BKL_1_bb-qq
Length: 17 nt
Canonical chains: JA, MA
Partition: train

MD-derived metadata

6.27 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 11.56 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AAAAAAAAAAAUUUUUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
JA	A	JA	bb
MA	B	MA	qq

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

63583a2fe042e4099f1e311276d0b60ee3e4b809319feb9cd6c046c3321fadcf

rna.gro · SHA-256

7055179b3225234c5c980d0b2f65c5155fc081cd767879a985753a9a42748625

rna.pdb · SHA-256

a6ac54723b06db685cd296277f0d6c7e5e85e883142d05b5919df436bd25ff9a