5BKN · JA / MA

rna_00688__5BKN_1_JA-MA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00688__5BKN_1_JA-MA
RNA-Solo ID: rna_00688
Split identity: rna_00688
Source structure: 5BKN_1_bb-qq
Length: 17 nt
Canonical chains: JA, MA
Partition: train

MD-derived metadata

6.44 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 13.20 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AAAAAAAAAAAUUUUUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
JA	A	JA	bb
MA	B	MA	qq

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

d05b704b5ab7b018138d234a235874209a52cd838a8aca7c3d186c758bb3dfe7

rna.gro · SHA-256

1d53cb30a8c0a74824217735d71b01d280b7bbf45af9e1349b1d73ad03e40a98

rna.pdb · SHA-256

3a56e5f5bb132e370fd4c0cd5a3efd4a80454c0bb1dbccef5a5c36ebba1de3e8