3JBP · JA

rna_00717__3JBP_1_JA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00717__3JBP_1_JA
RNA-Solo ID: rna_00717
Split identity: rna_00717
Source structure: 3JBP_1_AB
Length: 118 nt
Canonical chains: JA
Partition: train

MD-derived metadata

6.43 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.46 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GACUCGUUCAUACUACAGUGGAUACACCAGAUCCCAUCAGAACUCUGAAGUUAAGCACUGUAAGGCUUGGCUAGUACUGAGGUGGGAGACCGCUCGGGAACACCAGGUGAUGAGUCAG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
JA	A	JA	AB

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_00717__3JBP_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

21d79c09e72268d40acf80534f98b17bcc28e617e8275072472777b3dcc4de5b

rna.gro · SHA-256

58231f9fd3c5950b349dd2840b2ec836eda52f8c1f8fd3b7b8b23b6efd401459

rna.pdb · SHA-256

40db4c2f0db7b814c9e2e175cef21125cd7906f37ba931646b3e4b6e62bee358