3NDB · C

rna_00779__3NDB_1_C

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00779__3NDB_1_C
RNA-Solo ID: rna_00779
Split identity: rna_00779
Source structure: 3NDB_1_M
Length: 136 nt
Canonical chains: C
Partition: train

MD-derived metadata

5.67 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 36.76 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GUCUCGUCCCGUGGGGCUCGGCGGUGGGGGAGCAUCUCCUGUAGGGGAGAUGUAACCCCCUUUACCUGCCGAACCCCGCCAGGCCCGGAAGGGAGCAACGGUAGGCAGGACGUCGGCGCUCACGGGGGUGCGGGAC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	C	C	M

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

7b35997cc531d7a91b2532bdd15fc4ca9287fb64293445bdbe66128a8eb7e383

rna.gro · SHA-256

e3a6b08af8ea180da82ebfde270d714a23019d0ae74ebf8a23b20175767eea9d

rna.pdb · SHA-256

3092920d268fd9b2346063684774cd2730377cd4a1c9b2e467f8f4e70cf31cce