5JCS · PA

rna_00802__5JCS_1_PA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00802__5JCS_1_PA
RNA-Solo ID: rna_00802
Split identity: rna_00802
Source structure: 5JCS_1_y
Length: 158 nt
Canonical chains: PA
Partition: train

MD-derived metadata

21.70 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 43.04 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AAACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCCUUGGUAUUCCAGGGGGCAUGCCUGUUUGAGCGUCAUUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
PA	A	PA	y

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

76e5944f69fa04070b8142132a3df39cbc06f9d7ed1fe2c08f333212d1a23f56

rna.gro · SHA-256

39da3dd413d02e6f34dca22fc26f0f6ec86bfee3398a39aab21b38867674d208

rna.pdb · SHA-256

6700fd55c951b7915595911a1e522ab5cddaacf5418d7b24223361eabc7f60ce