405D · A / B

rna_00825__405D_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00825__405D_1_A-B
RNA-Solo ID: rna_00825
Split identity: rna_00825
Source structure: 405D_1_A-B
Length: 32 nt
Canonical chains: A, B
Partition: train

MD-derived metadata

1.99 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 15.31 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCAGACUUAAAUCUGCGCAGACUUAAAUCUGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

a6a639030a9d8603f23b5a226923cbf0123a357e4c97b3c1978c2e737ef45b78

rna.gro · SHA-256

7142be0ac89d6281f90ae68884cf6042df3a54d3ba2e5b624fe53182c6c237c3

rna.pdb · SHA-256

61a0e6e894e6f1f63fe44a9596f26f48936e447ceace13220ea957f4e89042b5