5T2A · G

rna_00832__5T2A_1_G

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00832__5T2A_1_G
RNA-Solo ID
rna_00832
Split identity
rna_00832
Source structure
5T2A_1_G
Length
183 nt
Canonical chains
G
Partition
train

MD-derived metadata

14.95 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
43.56 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GUGAGAUUGUGAAGGGAUCUCGCAGGUAUCGUGAGGGAAGUAUGGGGUAGUACGAGAGGAACUCCCAUGCCGUGCCUCUAGUUUCUGGGGUUUGUCGAACGGCAAGUGCCCCGAAGCCAUCGCACGGUGGUUCUCGGCUGAACGCCUCUAAGCCAGAAGCCAAUCCCAUGUCCAGAUGCCCAC
Canonical chainPDB chainlabel_asym_idauth_asym_id
GGGG

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

bd93a79d7e252e4192154955f3a7648b4c4272c349dff64b64302e91e47a98a4

rna.gro · SHA-256

c54988d6aae3cfd85699e69c71c3e0e5da85ef59d84250c76346dd4266f8a939

rna.pdb · SHA-256

25c55d76e0c660eaf37636f713f0d372f12bae0633c18a87e55b64b103d11734