6YSI · CA / DA

rna_00842__6YSI_1_CA-DA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00842__6YSI_1_CA-DA
RNA-Solo ID: rna_00842
Split identity: rna_00842
Source structure: 6YSI_1_8-6
Length: 13 nt
Canonical chains: CA, DA
Partition: train

MD-derived metadata

3.89 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 11.24 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCGGGCGCAACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
CA	A	CA	6
DA	B	DA	8

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

588319416c3e7449607b2c7ae71e03e04940df379217d3302b10bfeb99dccc7a

rna.gro · SHA-256

e4e6c181d7804eeb0440a7c01f14796ea9defc90bcc831d551e8ac9a400f988f

rna.pdb · SHA-256

91d11024b9d9c2d0367770ad8da54b8eaeeaf423cd019876246b828489d2aafd