8E40 · D / E

rna_00853__8E40_1_D-E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00853__8E40_1_D-E
RNA-Solo ID: rna_00853
Split identity: rna_00853
Source structure: 8E40_1_r-R
Length: 47 nt
Canonical chains: D, E
Partition: train

MD-derived metadata

4.40 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 20.48 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

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Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	R
E	E	E	r

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

c9dbe3f7313f0ec2977aa4e2f3ef4d7f6ba726fd20d03b5a161b05e7ab61c4c7

rna.gro · SHA-256

0fcb650cb4cdc37216c3aa331242628bc55a361e1f7ed8b77d39f68216afccee

rna.pdb · SHA-256

85725ba68368f9267f4dc63e33553854c07f98ee5a11ba34ff7cd5ac9956add8