4WKJ · C / E

rna_00869__4WKJ_1_C-E

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_00869__4WKJ_1_C-E
RNA-Solo ID
rna_00869
Split identity
rna_00869
Source structure
4WKJ_1_C
Length
24 nt
Canonical chains
C, E
Partition
val

MD-derived metadata

15.21 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
15.78 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GACACCUGAUUCGACACCUGAUUC
Canonical chainPDB chainlabel_asym_idauth_asym_id
CCCA
EEEC

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

b3fcd273239e35fafbbbafa20f2aecd6fc8698cebf15c2d904e60f48bd0905af

rna.gro · SHA-256

5ad797aa26fb60d446e578cc97fa87cef486c92ea548914bf445758129969551

rna.pdb · SHA-256

d1546efdd805f8912b969e6b58530ed5ddb9fa338c3115b035a34752a842cb88