5JC3 · E / F

rna_00895__5JC3_1_E-F

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_00895__5JC3_1_E-F
RNA-Solo ID: rna_00895
Split identity: rna_00895
Source structure: 5JC3_1_C-D
Length: 20 nt
Canonical chains: E, F
Partition: train

MD-derived metadata

1.47 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 11.64 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUACGUACCGGUACGUACC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	C
F	F	F	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

7458c4de3b8241003b67aea11000585507197e1ac5dc2bf44bc5e8b1f4792ad3

rna.gro · SHA-256

28cdae89452f10f976dbe5e12d57c31eec88ba607bc8db34fc589800d2bcd8e9

rna.pdb · SHA-256

daa2f455332052e1109baa6b73851f3f6bc8490ca4ae63a3248da3edf075576e