2PXT · A

rna_01047__2PXT_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01047__2PXT_1_A
RNA-Solo ID: rna_01047
Split identity: rna_01047
Source structure: 2PXT_1_B
Length: 49 nt
Canonical chains: A
Partition: train

MD-derived metadata

5.49 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 20.65 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCUGCUGUUUACCAGGUCAGGUCCGAAAGGAAGCAGCCAAGGCAGCGGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

1fb86556af0a12bfe959eac4f135639c206cc697a3edeb4c156aec3f873128f8

rna.gro · SHA-256

65365fcb88511f82156f8860fdd1b379b273bd12ab109a4516077261686f953d

rna.pdb · SHA-256

e4074f78e19f868ce4eba4b7c02ec830bfd24dc49cc401f24c39377704723c72