2O5J · E

rna_01049__2O5J_1_E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01049__2O5J_1_E
RNA-Solo ID: rna_01049
Split identity: rna_01049
Source structure: 2O5J_1_Y
Length: 16 nt
Canonical chains: E
Partition: train

MD-derived metadata

14.11 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 12.37 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GAGUCUGCGGCGCGCG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	Y

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

2618ceb236ccde701c1a8a8d3ab440e3920a7f1c5fb9debe02f3577435f865b2

rna.gro · SHA-256

fdb422a2fb7ecc5ffe29c16ebc1649a0cd67fe35308f93898086c30e3b8821e2

rna.pdb · SHA-256

639560ce65669ccda5e92e9ffa0435f9228ed7755fedbb74fffc346e79f6395f