2PPB · B

rna_01049__2PPB_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01049__2PPB_1_B
RNA-Solo ID: rna_01049
Split identity: rna_01049
Source structure: 2PPB_1_H
Length: 16 nt
Canonical chains: B
Partition: train

MD-derived metadata

9.98 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 12.56 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GAGUCUGCGGCGCGCG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	H

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

202989159fe61711e588f84fbf5dfe57512610c6b14a76cc85ea263fad8a362c

rna.gro · SHA-256

d2fcdf779c3352c104cb1b5c372aaf9f3017911799ea7797d7358e7f263452dd

rna.pdb · SHA-256

ed164a40fe5e31ccd622eaff4c34e1b3cce8ff6e4b377e033a890ef7a21818a4