2QKK · E / K

rna_01089__2QKK_1_E-K

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01089__2QKK_1_E-K
RNA-Solo ID: rna_01089
Split identity: rna_01089
Source structure: 2QKK_1_K
Length: 27 nt
Canonical chains: E, K
Partition: val

MD-derived metadata

12.61 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 15.44 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGACACCUGAUUCCGACACCUGAUUCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	K
K	K	K	X

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

9caf3f0000cdf4ba38316442293ecb4ab297482c3a07d4c0e06d9f09e6fc3509

rna.gro · SHA-256

50d7d7c6143533b87bd36d64bd84d154107fa8dfc63716eb724a3d224d78c37a

rna.pdb · SHA-256

641bb6d63876b18479a7587fafb811dc211cb923145ffd45e0d3bb04b446ff37