3E5C · A

rna_01094__3E5C_1_A

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_01094__3E5C_1_A
RNA-Solo ID
rna_01094
Split identity
rna_01094
Source structure
3E5C_1_A
Length
52 nt
Canonical chains
A
Partition
train

MD-derived metadata

4.17 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
20.65 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UUCCCGAAAGGAUGGCGGAAACGCCAGAUGCCUUGUAACCGAAAGGGGGAAU
Canonical chainPDB chainlabel_asym_idauth_asym_id
AAAA

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

58263a5476c4c5a70dbb107b381b4e8b70abe5cb0ac432651f84d5e28b7e29c7

rna.gro · SHA-256

43cc25380012399d006104b0550beb0d2c87bd830171b9ee5708d38dda6083c0

rna.pdb · SHA-256

63d14472cec7eabf94320b6f8c4725eda5fe5287fa0576cbe324dfcc5df31bac