3E5F · A

rna_01094__3E5F_1_A

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_01094__3E5F_1_A
RNA-Solo ID
rna_01094
Split identity
rna_01094
Source structure
3E5F_1_A
Length
52 nt
Canonical chains
A
Partition
train

MD-derived metadata

5.12 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
19.14 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UUCCCGAAAGGAUGGCGGAAACGCCAGAUGCCUUGUAACCGAAAGGGGGAAU
Canonical chainPDB chainlabel_asym_idauth_asym_id
AAAA

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

94ce9fdce0db275a29c3a8583f6dfaa7efa909b68f5ce0a8c4ccb105594b6248

rna.gro · SHA-256

5a0762d49698223d04698d547a633c7a4bd2ae9ddcbf5d525da7f418e016208f

rna.pdb · SHA-256

3722fee88c8a3f04c884e8b94991cbfbac9d223586210f95157c8e803a60e4c8