3ZLA · J

rna_01109__3ZLA_1_J

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01109__3ZLA_1_J
RNA-Solo ID: rna_01109
Split identity: rna_01109
Source structure: 3ZLA_1_J
Length: 44 nt
Canonical chains: J
Partition: train

MD-derived metadata

22.76 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 30.12 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

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Canonical chain	PDB chain	label_asym_id	auth_asym_id
J	J	J	J

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rg_spike;geometry:rmsd_high

Inherited warnings: geometry:rg_spike;geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

676a4588f81697327423fb21b74d4993cf3dca88188e4aa60a08c10be84fb2cd

rna.gro · SHA-256

a6c50931e36732e889ac3bedb45b50258198a443a87addc30183bec2ce5657c1

rna.pdb · SHA-256

e6c035044f0f7e48b7d17a110f87cb2b72a0df930cdfd359c923237d8ea0488a