7OPD · O

rna_01123__7OPD_1_O

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01123__7OPD_1_O
RNA-Solo ID: rna_01123
Split identity: rna_01123
Source structure: 7OPD_1_P
Length: 21 nt
Canonical chains: O
Partition: train

MD-derived metadata

9.38 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.61 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AUAUAUACAAAAUCGAGAGGA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
O	O	O	P

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

e8bfb678e30ac6296ee7cc7cfae36c7b85c00f639d50a043384d8cdbfefb5125

rna.gro · SHA-256

30747df730c1fcc78b79fcdab612aecc8691e6e06be57b22fa53e64a7e4660d1

rna.pdb · SHA-256

4d1bca3b15b55d266c7a0c73f7c66d54b59b2e93d08c63247b4ae63519ee3488