2YDH · A

rna_01153__2YDH_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01153__2YDH_1_A
RNA-Solo ID: rna_01153
Split identity: rna_01153
Source structure: 2YDH_1_A
Length: 94 nt
Canonical chains: A
Partition: train

MD-derived metadata

3.92 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.18 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCUUAUCAAGAGAGGUUUAGGGACUGGCCCGACGAAACCCGGCAACCAGAAAUGGUGCCAAUUCCUGCAGCGGAAACGUUGAAAGAUGAGCCG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

cf0b249c38f881d311e563a1c0f4dc2763924c7da9a5e3d7ad64bb0f76f42bc8

rna.gro · SHA-256

2ded623fdb1ba1693de2dde5c44481947fa28dcc81d8df5529d46126e03f0419

rna.pdb · SHA-256

dca1a1330027cbc41f61a8b9b51a141b645d8b275d50bd49ee38605e10e8a7f2