4V50 · DB

rna_01172__4V50_1_DB

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01172__4V50_1_DB
RNA-Solo ID: rna_01172
Split identity: rna_01172
Source structure: 4V50_1_CW
Length: 17 nt
Canonical chains: DB
Partition: train

MD-derived metadata

2.74 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 10.98 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UCGGGCUCAUAACCCGA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
DB	A	DB	CW

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_01172__4V50_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

aa06c55149373f6105f7e06a6ed9c0a4ef041d77aa99f48d41ae1a9ff28e427f

rna.gro · SHA-256

b32f50e33029b537a55251455a0bd48c6513e6ce2e0f4d706cc68c9fbde60363

rna.pdb · SHA-256

c5e61d3da436926f9ea3b61180428c4b5c4a58f4d37e6b9b2fd7bd0bd9a78d2f