4PDB · B

rna_01179__4PDB_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01179__4PDB_1_B
RNA-Solo ID: rna_01179
Split identity: rna_01179
Source structure: 4PDB_1_I
Length: 38 nt
Canonical chains: B
Partition: train

MD-derived metadata

4.55 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 16.77 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGAUGCUCAGUGAUCCUUCGGGAUAUCAGGGCAUCCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	I

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

4ac7f914095c38016948e81f6031065f7478e191ca295fc615d7f84fc59b6ddb

rna.gro · SHA-256

edc618b5a1894cb4a63b3b53039d6dba033b37879dcec27a0f82ce5217731ada

rna.pdb · SHA-256

405c3f2058205fcfbb66f5817ce8c92738edcc12f63c35d04b45a4c70015269f