5ZKJ · E

rna_01185__5ZKJ_1_E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01185__5ZKJ_1_E
RNA-Solo ID: rna_01185
Split identity: rna_01185
Source structure: 5ZKJ_1_E
Length: 12 nt
Canonical chains: E
Partition: train

MD-derived metadata

5.18 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 13.25 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGGGAUGUCACG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	E

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

d33c7f17437b32d971505d978c483f2f571e8b1d96192f258f196116a141ef52

rna.gro · SHA-256

a3910c0384849a5505d26fd6b78cf98be55af1105492023c0ebe4fe5c9d2a43b

rna.pdb · SHA-256

89d2bf1bdc15ec8f55f50bccf0b8b6c69a7b6421eb99e1606de7629d27896627