3D2V · A / B

rna_01188__3D2V_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01188__3D2V_1_A-B
RNA-Solo ID: rna_01188
Split identity: rna_01188
Source structure: 3D2V_1_A
Length: 154 nt
Canonical chains: A, B
Partition: test_struct

MD-derived metadata

6.38 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 30.69 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGACCAGGGGUGCUUGUUCACAGGCUGAGAAAGUCCCUUUGAACCUGAACAGGGUAAUGCCUGCGCAGGGAGUGUCGGGACCAGGGGUGCUUGUUCACAGGCUGAGAAAGUCCCUUUGAACCUGAACAGGGUAAUGCCUGCGCAGGGAGUGUC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

f8ac120a1e4da8e0c34ef21d9736380e7fb3c9f181bf2422389b883d05efa840

rna.gro · SHA-256

d50c48a1df285251dbac046c2653534cea94be23cd4affa91b4cdb08d3f73630

rna.pdb · SHA-256

16cb6c4c0afc24aababa639275cd5eba94d4d19abacbb62377c9441a0ac09849