1ZDK · A

rna_01217__1ZDK_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01217__1ZDK_1_A
RNA-Solo ID: rna_01217
Split identity: rna_01217
Source structure: 1ZDK_1_R
Length: 19 nt
Canonical chains: A
Partition: train

MD-derived metadata

1.45 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 11.43 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

ACAUGAGGAUCACCCAUGU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	R

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

805b8169c64bdb048c2249b553c77ba9a35c0e54bb50e356f8c700b2c42393c5

rna.gro · SHA-256

fb9df6753be8d645e8c3c25dc806b10e127b6e1eb81cf934d6bce67b1a706071

rna.pdb · SHA-256

9fbc36c7d76a53d7d9423276d01aba81c43a0fb13ae4e83d809cf53c22524222