6O8W · W

rna_01249__6O8W_1_W

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_01249__6O8W_1_W
RNA-Solo ID
rna_01249
Split identity
rna_01249
Source structure
6O8W_1_B
Length
116 nt
Canonical chains
W
Partition
train

MD-derived metadata

8.43 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
34.37 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGUGGUGGCGAUAGCGAGAAGGAUACACCUGUUCCCAUGCCGAACACAGAAGUUAAGCUUCUUAGCGCCGAUUGUAGUGAAGGGUUUCCCUUUGUGAGAGUAGGACGUCGCCACGC
Canonical chainPDB chainlabel_asym_idauth_asym_id
WWWB

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

1b20a3e818d87b8858551e7d1ce50878c4e1b673af49dc8e2bdfc97c98f0c256

rna.gro · SHA-256

34ea248b9ff6cc72c752ceb2a5c3e982e9c61c892a912e7a00533f93d37f68a5

rna.pdb · SHA-256

ee58f4c83d37ecee0e0d38f50aac161b55366eb33555e98c4dddfb547d791106