1DUQ · A / B / C / D

rna_01259__1DUQ_1_A-B-C-D__repeat02

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01259__1DUQ_1_A-B-C-D__repeat02
RNA-Solo ID: rna_01259
Split identity: rna_01259
Source structure: 1DUQ_1_B-A
Length: 52 nt
Canonical chains: A, B, C, D
Partition: train

MD-derived metadata

3.46 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 21.42 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCUGGGCGCAGGCCUGACGGUACAGCGCUGGGCGCAGGCCUGACGGUACAGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B
C	C	C	C
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

ff7c7b68c00f03e073109324cbe093bd8eed6963661651d53525a62f348ec368

rna.gro · SHA-256

e876e1b533123c00d5d2dbc6aa90f3823f5bd48fa0ed5b385807a4f47ed93642

rna.pdb · SHA-256

978453b1b4dd98a9a12622641d101152369f80d5f213dd232fd678715c073958