3J9Z · C

rna_01287__3J9Z_1_C

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01287__3J9Z_1_C
RNA-Solo ID: rna_01287
Split identity: rna_01287
Source structure: 3J9Z_1_S7
Length: 74 nt
Canonical chains: C
Partition: train

MD-derived metadata

5.29 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.89 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCAC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	A	C	S7

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_01287__3J9Z_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

bc573539c54a20ab1871f89ffda4b15d4efa7b755250812efffe606a10debeca

rna.gro · SHA-256

c312fb16e6129e8a2f4081b1545d8848be9564e0e50c02d4c883cc0c3cf5ce27

rna.pdb · SHA-256

fe66fee6fa25c52741be5ce9542a36c404629f0c5c39ecadf66a33dd701b70d0