5XUS · B

rna_01311__5XUS_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01311__5XUS_1_B
RNA-Solo ID: rna_01311
Split identity: rna_01311
Source structure: 5XUS_1_B
Length: 40 nt
Canonical chains: B
Partition: val

MD-derived metadata

14.13 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 26.83 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AAUUUCUACUAAGUGUAGAUGGAAAUUAGGUGCGCUUGGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rg_spike

Inherited warnings: geometry:rg_spike

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

54025fb0bd0a823cbad7263dc67354d245111934806c44183434dce68d8cd667

rna.gro · SHA-256

a39fea69464cb440e7394305c6fdeac6313b2d182469234d1a72f156a432f121

rna.pdb · SHA-256

56a24f0586467e13ee754e458b3615fbfa52c258d83ccae5ac6fd60a34b7cb80