6DB8 · B

rna_01340__6DB8_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01340__6DB8_1_B
RNA-Solo ID: rna_01340
Split identity: rna_01340
Source structure: 6DB8_1_R
Length: 60 nt
Canonical chains: B
Partition: train

MD-derived metadata

2.41 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 18.94 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGAUGCGCCUUGAAAAGCCUGCGAAACACGCAGCUGGUGAAUGACAGCUAUGGCGCAUCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	R

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

6ea0971afed91faa4cb2c4cf24001a94d2c1e23c364052211813a326e400a37e

rna.gro · SHA-256

1ca346d158de77b8e6e9e2f54eab429ce0a83f4a7bab8954d4577d02fbb63130

rna.pdb · SHA-256

4eef03aa16664bbb613c90c54eb0af002472b91d1cc645f7f7cad964a11f5dfa