3AKZ · E

rna_01373__3AKZ_1_E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01373__3AKZ_1_E
RNA-Solo ID: rna_01373
Split identity: rna_01373
Source structure: 3AKZ_1_F
Length: 74 nt
Canonical chains: E
Partition: train

MD-derived metadata

5.41 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.88 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGGGAGGUCGUCUAACGGUAGGACGGCGGACUCUGGAUCCGCUGGUGGAGGUUCGAGUCCUCCCCUCCCAGCCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	F

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

bda06953855a96ad07b123ce53d156efc8e5d54a128b7dd7d7ec30af98752b8a

rna.gro · SHA-256

39dfb0fb9ece469b6a89010a95a97052fe33e47febe656408e46182063e15511

rna.pdb · SHA-256

cc8d9dc290555c288ab2143114068c07d5cb952ad72635e2b7efeb7ab16841e9