4V61 · X

rna_01398__4V61_1_X

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01398__4V61_1_X
RNA-Solo ID: rna_01398
Split identity: rna_01398
Source structure: 4V61_1_BC
Length: 103 nt
Canonical chains: X
Partition: val

MD-derived metadata

8.71 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 32.19 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GAAGGUCACGGCGAGACGAGCCGUUUAUCAUUACGAUAGGUGUCAAGUGGAAGUGCAGUGAUGUAUGCAGCUGAGGCAUCCUAACAGACCCACAGACUUGAAC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
X	A	X	BC

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_01398__4V61_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

9b489e59d59301f88919a88c7c43ad08dd1a45b907f1743e4e2fd606f766d258

rna.gro · SHA-256

3c0aea40b8cfa67b974d5e8365aec043ad24da5b227012866f6e0ece4aa2bfb5

rna.pdb · SHA-256

ad7b74b7dc1df8c9a55e41230c55612c721ad54e0f80391989d0e58b9d910652