3X1L · I

rna_01407__3X1L_1_I

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01407__3X1L_1_I
RNA-Solo ID: rna_01407
Split identity: rna_01407
Source structure: 3X1L_1_I
Length: 32 nt
Canonical chains: I
Partition: train

MD-derived metadata

31.18 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 20.83 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AUUGAAAGUUGUAGUAUGCGGUCCUUGCGGCU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
I	I	I	I

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

6028a5ce1f9e88a3ea52c6403e5c7c529a03ed66fef174b7afcee819c39f6671

rna.gro · SHA-256

555af7cdb752df24d6eed84b24a57540926ca602fad5eac25580835d60793108

rna.pdb · SHA-256

e4f9144c79894cb960dda00a61ec75a76165c439b4a187569f621e85cd73a240