2PY9 · B

rna_01544__2PY9_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01544__2PY9_1_B
RNA-Solo ID: rna_01544
Split identity: rna_01544
Source structure: 2PY9_1_F
Length: 12 nt
Canonical chains: B
Partition: train

MD-derived metadata

6.95 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 13.31 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AACCCUAACCCU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	F

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

9ebb86847a9ecbd4a4ee434f7ca1975c6b07734236416586f11cc6d5fa220fd3

rna.gro · SHA-256

411e29904c0c3360addcb7eda1c58eda5ba2c4eab3969dec20740782e01739ae

rna.pdb · SHA-256

add29bd8a6f5a557ce09374afdf129b6b7616c6a1f4ed61f5cceda4ea9268bf8