3PIO · B

rna_01561__3PIO_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01561__3PIO_1_B
RNA-Solo ID: rna_01561
Split identity: rna_01561
Source structure: 3PIO_1_Y
Length: 120 nt
Canonical chains: B
Partition: train

MD-derived metadata

8.25 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.12 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

ACCCCCGUGCCCAUAGCACUGUGGAACCACCCCACCCCAUGCCGAACUGGGUCGUGAAACACAGCAGCGCCAAUGAUACUCGGACCGCAGGGUCCCGGAAAAGUCGGUCAGCGCGGGGGU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	Y

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

eb2768678148fcb95e62d11bb13c924300869ef9f8e40c6291928c308a16115b

rna.gro · SHA-256

e9fbbb3aab4ce30f04e45544066b3d7749ff46eeb4b29c391f7938de9e890f21

rna.pdb · SHA-256

4d9e4f63f82350ef3e367d46cf35e525876dd6544f3eecaf4a1be2bfba98f490