3PIP · B

rna_01561__3PIP_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01561__3PIP_1_B
RNA-Solo ID: rna_01561
Split identity: rna_01561
Source structure: 3PIP_1_Y
Length: 120 nt
Canonical chains: B
Partition: train

MD-derived metadata

7.10 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 33.58 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

ACCCCCGUGCCCAUAGCACUGUGGAACCACCCCACCCCAUGCCGAACUGGGUCGUGAAACACAGCAGCGCCAAUGAUACUCGGACCGCAGGGUCCCGGAAAAGUCGGUCAGCGCGGGGGU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	Y

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

034cfd798de41cf02c5b2f702b14b8fd4b05767ea733df3ac1a6527e4347a6cc

rna.gro · SHA-256

bd253428b29e9f5453a34622c823a7382fc1b26edbf508a68779ec557e7a79e8

rna.pdb · SHA-256

e6a254f42009ae12b9d96358c46aaf19a060af48319352eed0ed36aa6dc9fe2b