5JVG · B

rna_01561__5JVG_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01561__5JVG_1_B
RNA-Solo ID: rna_01561
Split identity: rna_01561
Source structure: 5JVG_1_Y
Length: 120 nt
Canonical chains: B
Partition: train

MD-derived metadata

6.19 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 33.69 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

ACCCCCGUGCCCAUAGCACUGUGGAACCACCCCACCCCAUGCCGAACUGGGUCGUGAAACACAGCAGCGCCAAUGAUACUCGGACCGCAGGGUCCCGGAAAAGUCGGUCAGCGCGGGGGU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	Y

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

63836eb69d91b2539ebe9889126776cd8b65bb07f895c8be93f563773bd224ec

rna.gro · SHA-256

0709179a202cf12b9fd481477e640c091b2d9865e3266737aae46596a037693b

rna.pdb · SHA-256

b8e44f2be2cff94363a0033df0cc620d818d97c577537d44aa05675e8d874d4c